Author

Larry L. Smarr

University of California San DiegoORCID 0000-0003-2003-7700Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:proteomics· 1

Frequent Co-Authors

Alexey A. GurevichiD· 1 shared Almut HeinkeniD· 1 shared Andrey D. PrjibelskiiD· 1 shared Arianna BasileiD· 1 shared Bahar Behsaz· 1 shared Fernando VargasiD· 1 shared Giorgio ValleiD· 1 shared Hosein MohimaniiD· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBioinformatics

Alexey A. GurevichORCID

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2 papers

Recent·Most cited

Longitudinal flux balance analyses of a patient with Crohn's disease highlight microbiome metabolic alterations

Arianna Basile, Almut Heinken, Johannes Hertel, Larry L. Smarr, Weizhong Li, Laura Treu, Giorgio Valle, Stefano Campanaro, Ines Thiele

This study uses longitudinal flux balance analysis of a Crohn's disease patient's microbiome to identify time-correlated metabolic alterations and their systemic effects.

bioRxiv · Dec 19, 2022 · PreprintSystems Biology

De Novo Peptide Sequencing Reveals a Vast Cyclopeptidome in Human Gut and Other Environments

Bahar Behsaz, Hosein Mohimani, Alexey A. Gurevich, Andrey D. Prjibelski, Mark F. Fisher, Fernando Vargas, Larry L. Smarr, Pieter C. Dorrestein, Joshua S. Mylne, Pavel A. Pevzner

The paper introduces CycloNovo, a de novo cyclopeptide sequencing algorithm, revealing a vast hidden cyclopeptidome in the human gut and other environments.

Cell Systems · Dec 18, 2019Peer-reviewedBioinformatics