Alan James Bridge

The paper reannotates ligand binding sites in UniProtKB using ChEBI identifiers and improves search facilities for these annotations.

The paper translates HAMAP proteome annotation rules into SPARQL queries for reusable genome and proteome annotation across different datasets.

The paper assesses the value and sustainability of ELIXIR Core Data Resources, showing their critical role in preserving biological data and highlighting funding challenges.

The paper updates UniProtKB enzyme annotations using Rhea, replacing textual descriptions with structured biochemical reaction data and improving search capabilities.

The paper presents a dataset of 28,000 annotations describing how amino acid mutations affect protein interactions, available through the IntAct website.