Philip C. Bentz

This study investigates phylogenetic discordance in the Asparagaceae family using nuclear gene data, identifying sources like incomplete lineage sorting and ancient hybridization.

CBS-tools identifies, phases, and annotates sex chromosomes using k-mer analysis from whole-genome sequencing data across multiple species.

The paper identifies an X-linked sex determination mechanism in cannabis and hop, showing that an X-linked gene involved in ethylene biosynthesis controls female inflorescence development, while the Y chromosome lacks clear sex-determining genes.

This study compares the evolution of XY sex chromosomes in two closely related Asparagus clades, revealing distinct genetic mechanisms and timing for the origin of dioecy.

This study constructs a chromosome-scale cannabis pangenome to explore genomic diversity and evolution, revealing low diversity in cannabinoid synthase genes and high diversity in other regions.

This study characterizes the genomes of two novel Epichloe hybrid strains, showing fragmentation and rearrangement post-hybridization but retention of most gene homologs.

This study develops and applies long-read low-pass sequencing for high-resolution trait mapping in peanut, showing improved variant detection and cost-effectiveness compared to short-read methods.

This study uses phylogenomic analysis to show two independent origins of dioecy in Asparagus, linked to range expansions from southern Africa and bursts of diversification.