Author

Ashish A. Mahabal

California Institute of TechnologyORCID 0000-0003-2242-0244Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Microbiology· 1 Scientific Communication & Education· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:benchmark study· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Organism:fungi (other)· 1 Organism:human· 1

Frequent Co-Authors

Daniel J. CrichtoniD· 2 shared Adam C. GoweriD· 1 shared Adriana Ivich· 1 shared Aleksandar MilosavljeviciD· 1 shared Alex Shilin· 1 shared Allissa DillmaniD· 1 shared Amanda Courtright-LimiD· 1 shared Andreas BueckleiD· 1 shared

Activity by Year

2018-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersScientific Communication & Education

Daniel J. CrichtonORCID

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3 papers

Recent·Most cited

MicrobiologybioRxivPreprintAug 25, 2026

Predicting Fungal Contaminants for Space Missions Using Proteome-Wide Screening for Protein Orthologs

Ashish A. Mahabal, Vannsh Jani, Stanislav George Djorgovski…·Swati Bijlani

The paper develops a pipeline to identify fungi with adaptation potential and pathogenic risks in spaceflight environments using proteome-wide ortholog screening.

DOI 10.64898/2026.08.22.746478

fungi (other)proteomics

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Scientific Communication & EducationbioRxivPreprintApr 16, 2026

The Common Fund Data Ecosystem (CFDE)

Julie A. Jurgens, Andreas Bueckle, Jeet Kiran Vora…·Casey S. Greene

The paper describes the Common Fund Data Ecosystem (CFDE), which integrates NIH Common Fund data resources to enable discovery, analysis, and collaboration across heterogeneous datasets.

1 citation

database / resource

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GenomicsBMC GenomicsPeer-reviewedMar 6, 2018

Summarizing Performance for Genome Scale Measurement of miRNA: Reference Samples and Metrics

P. Scott Pine, Steven P. Lund, Jerod Parsons…·Marc Salit

The paper evaluates reference samples for genome-scale miRNA profiling and develops metrics and an online pipeline to assess measurement performance.

7 citations

humanbulk RNA-seq

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