Author

Malte Herold

Luxembourg Institute of Science and TechnologyORCID 0000-0003-2627-0159Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Microbiology· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:comparative / phylogenetic analysis· 2 Assay:metagenomics· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Approach:deep learning· 1

Frequent Co-Authors

Dominika KlimekiD· 2 shared Magdalena CałusińskaiD· 2 shared Paul WilmesiD· 2 shared Anna Heintz-Buschart· 1 shared Anna SchnüreriD· 1 shared Anne KayseniD· 1 shared Bettina MülleriD· 1 shared Cédric C. Laczny· 1 shared

Activity by Year

2016-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersMicrobiology

Dominika KlimekORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

MicrobiologybioRxivPreprintNov 11, 2025

Phylum-wide propionate degradation and its potential connection to poly- γ-glutamate biosynthesis in Candidatus Cloacimonadota

Magdalena Całusińska, Malte Herold, Dominika Klimek…·Xavier Goux

This study identifies an alternative methylmalonyl-CoA pathway in Cloacimonadota, linking propionate degradation to poly-γ-glutamate biosynthesis and syntrophic interactions with methanogens.

1 citation

metagenomicscomparative / phylogenetic analysis

𝕏 PostBluesky

MicrobiologyBMC GenomicsPeer-reviewedMay 27, 2024

Comparative genomic analysis of Planctomycetota potential towards complex polysaccharide degradation identifies phylogenetically distinct groups of biotechnologically relevant microbes

Dominika Klimek, Malte Herold, Magdalena Całusińska

This study identifies phylogenetically distinct Planctomycetota groups with diverse CAZyme capabilities for complex polysaccharide degradation, highlighting potential biotechnological applications.

84 citationstop 1%

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

BioinformaticsGenome BiologyPeer-reviewedDec 16, 2016

IMP: a pipeline for reproducible metagenomic and metatranscriptomic analyses

Shaman Narayanasamy, Yohan Jarosz, Emilie E.L. Muller…·Paul Wilmes

IMP is a pipeline that integrates metagenomic and metatranscriptomic data for microbial community analysis, improving assembly quality and enabling abundance and activity estimation.

DOI 10.1186/s13059-016-1116-8

metagenomicsdeep learning

𝕏 PostBluesky