Author

James Ashcroft

Wellcome Sanger InstituteORCID 0000-0003-2964-5032Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:cell type annotation· 2 Research Focus:cell-cell communication· 2 Organism:human· 2 Assay:scRNA-seq· 2 Assay:spatial transcriptomics· 2 Approach:statistical model· 2 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Cecilia Icoresi-MazzeoiD· 2 shared Erick ArmingoliD· 2 shared Luz García‐AlonsoiD· 2 shared Martin PreteiD· 2 shared Roser Vento-TormoiD· 2 shared Agnieszka Jaciow· 1 shared Alexander V. PredeusiD· 1 shared Aljes BinkevichiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersCell Biology

Cecilia Icoresi-MazzeoORCID

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2 papers

Recent·Most cited

Cell BiologybioRxivPreprintJun 8, 2026

Spatial atlas of the ovary identifies molecular events in primordial follicle activation in humans

Luz García‐Alonso, James Ashcroft, Callum Tromans‐Coia…·Roser Vento-Tormo

This study creates a comprehensive spatial atlas of the human ovarian cortex, revealing molecular mechanisms of primordial follicle activation and follicle niche organization.

DOI 10.64898/2026.06.05.730381

humanscRNA-seq

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BioinformaticsbioRxivPreprintMay 9, 2025

Atlas-scale metabolic activities inferred from single-cell and spatial transcriptomics

Erick Armingol, James Ashcroft, Magda Marečková…·Roser Vento‐Tormo

The paper introduces scCellFie, a framework to infer metabolic activities from single-cell and spatial transcriptomics data, revealing organ-specific metabolic programs and disease-associated alterations.

20 citations

humanmouse

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