GenomicsbioRxivPreprint
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MAT-classifier: A memory-efficient pipeline for accurate genus level profiling from ancient metagenomic data
Aranya Dhibar, Mikhail V. Matz
Per-genus Bowtie2 or BWA-aln alignments in place of MALT cut alignment-stage memory from about 140 GB (aMeta) to about 7 GB and gave higher simulated-data AUC (0.87 vs 0.79).