Author

Sarah C. Brüningk

SIB Swiss Institute of BioinformaticsORCID 0000-0003-3176-1032Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Cancer Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:bacteria (other)· 1 Research Focus:batch correction / integration· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Organism:human· 1 Assay:imaging· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Alejandro Tejada-ArranziD· 1 shared Ana Guerreiro StückliniD· 1 shared Andrea Joseph De MicheliiD· 1 shared Antonela Petrović· 1 shared Augustine Eze· 1 shared Christine SurretteiD· 1 shared Daniel de la NavaiD· 1 shared Denise Morinigo· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Alejandro Tejada-ArranzORCID

Author profile →

2 papers

Recent·Most cited

Cancer BiologybioRxivPreprintMar 23, 2025

Mapping Tumor Microenvironment and Treatment Response of Diffuse Midline Glioma Using Multiplexed Immunofluorescence and AI Models

Sandra Laternser, Andrea Joseph De Micheli, Sarah C. Brüningk…·Javad Nazarian

The paper uses multiplexed immunofluorescence and AI models to analyze the tumor microenvironment of diffuse midline glioma and predict antigens from H&E staining.

2 citations

humanspatial transcriptomics

𝕏 PostBluesky

BioinformaticsBioinformatics AdvancesPeer-reviewedJan 1, 2022

reComBat: Batch effect removal in large-scale, multi-source omics data integration

Michael F. Adamer, Sarah C. Brüningk, Alejandro Tejada-Arranz…·Karsten Michael Borgwardt

reComBat removes batch effects from large-scale, multi-source omics data while preserving biological variation, outperforming existing methods for public gene expression data of Pseudomonas aeruginosa.

27 citations

bacteria (other)bulk RNA-seq

𝕏 PostBluesky