Arthur Dondi

LongSom detects somatic variants in LR scRNA-seq data without normal samples, revealing clonal heterogeneity in ovarian cancer.

CTAT-LR-fusion detects fusion transcripts from long and short read RNA-seq data, improving accuracy in bulk and single cell transcriptomes.

V-pipe 3.0 is a computational pipeline for analyzing viral genomic data, enabling reproducible and scalable estimation of within-sample genetic diversity.

The paper examines SARS-CoV-2 genetic diversity within individual patients, finding that a small number of patients carry most of the diversity and that older patients tend to have more diverse viral variants.