Author

Zhanrui Cai

Iowa State UniversityORCID 0000-0003-3359-9446Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:scRNA-seq· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Research Focus:batch correction / integration· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1 Research Focus:imputation· 1

Frequent Co-Authors

Kathryn RoederiD· 2 shared Jin‐Hong DuiD· 1 shared Jing LeiiD· 1 shared

Activity by Year

2022-2022 · peak 2/yr

Co-Author Collaboration Network

3 top collaborators · 2 mutual co-author links

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2 shared papersGenomics

Kathryn RoederORCID

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2 papers

Recent·Most cited

GenomicsProceedings of the National Academy of SciencesPeer-reviewedDec 2, 2022

Robust probabilistic modeling for single-cell multimodal mosaic integration and imputation via scVAEIT

Jin‐Hong Du, Zhanrui Cai, Kathryn Roeder

This paper introduces scVAEIT, a probabilistic variational autoencoder for integrating and imputing multimodal single-cell data with mosaic measurements, showing improved performance across unseen cell types and tissues.

48 citations

scRNA-seqproteomics

𝕏 PostBluesky

GenomicsProceedings of the National Academy of SciencesPeer-reviewedAug 15, 2022

Model-free Prediction Test with Application to Genomics Data

Zhanrui Cai, Jing Lei, Kathryn Roeder

The paper introduces a model-free prediction test to assess if X contributes to predicting Y, showing improved power in gene expression analyses using CITE-seq and spatial transcriptomics data.

10 citations

humanscRNA-seq

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