Author

David R. Lapen

Agriculture and Agri-Food CanadaORCID 0000-0003-3363-6964Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Ecology· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Research Focus:ecology & biodiversity· 1 Assay:metagenomics· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Organism:virus· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Andrew C. RileyiD· 1 shared Bráulio S.M.L. SilvaiD· 1 shared Carson Kai-Sang LeungiD· 1 shared Chad LaingiD· 1 shared Emilia Craiovan· 1 shared Graham W. TayloriD· 1 shared Huu-Tai NguyeniD· 1 shared Josip RudariD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperEcology

Andrew C. RileyORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

EcologyMolecular EcologyPeer-reviewedMay 1, 2026

Fine-scale ecological biomonitoring in a large, complex agriculturally impacted watershed via eDNA metabarcoding

Bráulio S.M.L. Silva, Andrew C. Riley, Emilia Craiovan…·Mehrdad Hajibabaei

This study uses eDNA metabarcoding to assess biodiversity in an agriculturally impacted watershed, finding greater taxonomic richness and clearer land-use patterns compared to traditional morphology-based methods.

DOI 10.1111/mec.70377

metagenomicsdeep learning

𝕏 PostBluesky

BioinformaticsGigaSciencePeer-reviewedJan 1, 2025

WaveSeekerNet: Accurate Prediction of Influenza A Virus Subtypes and Host Source Using Attention-Based Deep Learning

Huu-Tai Nguyen, Josip Rudar, Nathaniel Lesperance…·Oliver Lung

WaveSeekerNet predicts IAV subtypes and host source using attention-based deep learning, outperforming existing models in accuracy and efficiency.

3 citations

viruswhole-genome sequencing

𝕏 PostBluesky