Author

Vijay Narayan

Johns Hopkins University Applied Physics Laboratory;ORCID 0000-0003-4067-9313Unclaimed ORCID profile · follow to get notified of new preprints

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Vijay Narayan1 paper · Johns Hopkins University

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Bioinformatics· 1

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Organism:bacteria (other)· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:metagenomics· 1 Approach:transformer / foundation model· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Brian MerrittiD· 1 shared Daniel JimeneziD· 1 shared Daniel S BermaniD· 1 shared Jeremy RatcliffiD· 1 shared Molly E GallagheriD· 1 shared Sanjeevani ChoudheryiD· 1 shared Stanley TaiD· 1 shared

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2026-2026 · peak 1/yr

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7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Brian MerrittORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintNov 4, 2026

MicrobeRT: A Framework and Suite of Fine-tuned Language Models for Genomic Sequences

Vijay Narayan, Brian Merritt, Sanjeevani Choudhery…·Molly E Gallagher

MicrobeRT is a framework of fine-tuned language models for metagenomic analysis, achieving strong performance in taxonomic classification, antibiotic resistance detection, and pathogenicity assessment.

DOI 10.64898/2026.11.03.763945

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