Difei Wang

The paper analyzes ICE content and variability in 1011 H. pylori strains, showing their prevalence, gene erosion, and role in shaping genome architecture through horizontal transfer and recombination.

The paper identifies three subtypes of NS-LUAD using RNA-seq data and develops a 60-gene signature that predicts survival across subgroups.

This paper introduces SATS, a framework for mutational signature analysis in targeted sequencing data, and presents a pan-cancer catalogue of mutational signatures from 111,711 tumors.

SUITOR selects the optimal number of mutational signatures using cross-validation, improving accuracy over existing methods in cancer genomics.

The paper identifies three immune subtypes in luminal breast cancer through immune gene expression profiling and links them to distinct genomic and clinical features.