Author

André C. Pereira

University of LisbonORCID 0000-0003-4112-4037Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:phylogenetics / evolution· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Ana BotelhoiD· 2 shared Gonçalo Espregueira ThemudoiD· 2 shared Mónica V. CunhaiD· 2 shared Daniela PintoiD· 1 shared José LourençoiD· 1 shared

Activity by Year

2023-2023 · peak 2/yr

Co-Author Collaboration Network

5 top collaborators · 9 mutual co-author links

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2 shared papersGenomics

Ana BotelhoORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintNov 1, 2023

Population structure and history of Mycobacterium bovis European 3 clonal complex reveal transmission across ecological corridors of unrecognised importance in Portugal

André C. Pereira, José Lourenço, Gonçalo Espregueira Themudo…·Mónica V. Cunha

The paper analyzes M. bovis transmission dynamics in Portugal using genomic and ecological data, revealing an unrecognised ecological corridor for disease spread between livestock and wildlife.

DOI 10.1101/2023.11.01.564909

whole-genome sequencingstatistical model

𝕏 PostBluesky

GenomicsbioRxivPreprintAug 24, 2023

Rescue of Mycobacterium bovis DNA obtained from cultured strains during official surveillance of animal TB: key steps for robust whole genome sequence data generation

Daniela Pinto, Gonçalo Espregueira Themudo, André C. Pereira…·Mónica V. Cunha

The paper describes methods to recover whole genome sequence data from challenging M. bovis DNA samples, improving the success rate of genome recovery from archived cultures.

DOI 10.1101/2023.08.24.554648

whole-genome sequencingstatistical model

𝕏 PostBluesky