Author

Jinghan Yang

Chinese Academy of SciencesORCID 0000-0003-4203-4367Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Jinghan Yang1 paper · University of Hong Kong

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Approach:deep learning· 3 Assay:proteomics· 3 Research Focus:benchmarking· 2 Research Focus:protein structure prediction· 2 Research Focus:software / tool· 2

Frequent Co-Authors

Yan FuiD· 3 shared Ping XuiD· 2 shared Cheng ChangiD· 1 shared Di ZhangiD· 1 shared Fuzhou Gong· 1 shared Haipeng WangiD· 1 shared Hao ChiiD· 1 shared Jiaxin Dai· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersBioinformatics

Yan FuORCID

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3 papers

Recent·Most cited

DiNovo: high-coverage, high-confidence de novo peptide sequencing using mirror proteases and deep learning

Zixuan Cao, Xueli Peng, Di Zhang, Piyu Zhou, Kang Li, Hao Chi, Ruitao Wu, Zhiyuan Cheng, Yao Zhang, Jiaxin Dai, Yanchang Li, Lijin Yao, Xinming Li, Jinghan Yang, Haipeng Wang, , Yan Fu

DiNovo improves de novo peptide sequencing by using mirror proteases and deep learning, achieving higher coverage and confidence than single-protease methods.

bioRxiv · Mar 20, 2025 · PreprintBioinformatics

DeepDetect: deep learning of peptide detectability enhanced by peptide digestibility

Jinghan Yang, Zhiyuan Cheng, Fuzhou Gong, Yan Fu

DeepDetect predicts peptide detectability using digestibility features, achieving higher accuracy than existing methods across multiple proteases.

Analytical Chemistry · Mar 13, 2023Peer-reviewedBioinformatics

DeepDigest: prediction of protein proteolytic digestion with deep learning

Jinghan Yang, Zhiqiang Gao, Xiuhan Ren, Jie Sheng, Ping Xu, Cheng Chang, Yan Fu

DeepDigest predicts proteolytic cleavage sites for eight proteases using a deep learning model, outperforming traditional methods across multiple datasets.

Analytical Chemistry · Apr 7, 2021Peer-reviewedBioinformatics