Author
University of California, Santa BarbaraORCID 0000-0003-4221-1247Unclaimed ORCID profile · follow to get notified of new preprints
3 papers
Recent·Most cited
Jacob H. Wynne, Rowan H. McLachlan, Andrew R. Thurber
The paper identifies methane oxidation mechanisms in Antarctic sediments, finding denitrification-mediated oxidation and aerobic methanotrophy as primary sinks instead of the typical ANME-SRB pathway.
Nima Azbijari, Jacob H. Wynne, Kristopher Irizarry…·Maude M. David
This paper introduces Nammu, a state-space model for metagenomic data that outperforms Transformer-based models in taxonomic and functional predictions.
Jacob H. Wynne, Nima Azbijari, Andrew R. Thurber, Maude M. David
This paper introduces BioGeoFormer, a protein language model that classifies unknown genes into biogeochemical pathways, outperforming traditional methods in identifying functional roles in deep-sea microbial genes.