Author

Misha E. Kilmer

Tufts UniversityORCID 0000-0003-4249-4742Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Research Focus:dimensionality reduction· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Approach:matrix factorization· 1 Assay:scRNA-seq· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Anna KonstorumiD· 2 shared Steven H. KleinsteiniD· 2 shared Edel AroniD· 1 shared Ferhat AyiD· 1 shared Jian Xing· 1 shared Joaquin ReynaiD· 1 shared Max Mattessich· 1 shared Shuchin AeroniD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 20 mutual co-author links

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2 shared papersBioinformatics

Anna KonstorumORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJul 9, 2026

Assessing tensor decomposition quality of immune profiling data from a dictionary learning perspective

Anna Konstorum, Jian Xing, Shuchin Aeron…·Steven H. Kleinstein

The paper introduces metrics for assessing tensor decomposition quality in immune profiling data using a dictionary learning framework.

DOI 10.64898/2026.07.03.736447

statistical modelmatrix factorization

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedDec 26, 2024

nipalsMCIA: Flexible Multi-Block Dimensionality Reduction in R via Nonlinear Iterative Partial Least Squares

Max Mattessich, Joaquin Reyna, Edel Aron…·Anna Konstorum

The paper introduces nipalsMCIA, a tool for multi-omics dimensionality reduction that improves speed and flexibility over existing methods for single-cell data.

3 citations

bulk RNA-seqscRNA-seq

𝕏 PostBluesky