Benchmarking long-read variant sensitivity across ONT and PacBio platforms using known clinically reported variants in a cohort of critically ill newborns
Colby T. Marvin, Joseph M. Devaney, Kati J. Buckingham…·Jessica X. Chong
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University of WashingtonORCID 0000-0003-4410-1973Unclaimed ORCID profile · follow to get notified of new preprints
Mutual co-authors in cluster
5 papers
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Colby T. Marvin, Joseph M. Devaney, Kati J. Buckingham…·Jessica X. Chong
Sophie Hespe, Emma S. Singer, Chloe M. Reuter…·Jodie Ingles
The paper evaluates the clinical validity of heterozygous ALPK3 loss-of-function variants as a cause of hypertrophic cardiomyopathy, finding strong gene-disease association with reduced penetrance.
Tara Lynn Wenger, Abbey A. Scott, Lukas Kruidenier…·Michael J. Bamshad
SeqFirst-neo uses a genotype-driven workflow with broad exclusion criteria to increase access to rapid whole genome sequencing in critically ill newborns, significantly improving the rate and equity of precise genetic diagnoses.
Jessica X. Chong, Matthew Carter Childers, Colby T. Marvin…·Michael J. Bamshad
The paper identifies heterozygous missense variants in ACTC1 as the cause of distal arthrogryposis with congenital heart defects in five families.
Caroline B. Pantazis, Andrian Yang, Erika Lara…·Florian T. Merkle
The paper identifies and characterizes a reference iPSC line, KOLF2.1J, for standardized use in collaborative studies across multiple differentiation protocols and assays.