Author

Eric J. South

Boston UniversityORCID 0000-0003-4426-3729Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Organism:bacteria (other)· 1 Assay:DNA methylation· 1 Research Focus:sequence-to-function modeling· 1 Approach:statistical model· 1

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Mary J. DunlopiD· 1 shared Virgile AndreaniiD· 1 shared

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2024-2024 · peak 1/yr

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Mary J. DunlopORCID

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1 paper

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Systems BiologyPLoS Computational BiologyPeer-reviewedJul 24, 2024

Generating information-dense promoter sequences with optimal string packing

Virgile Andreani, Eric J. South, Mary J. Dunlop

The paper introduces a method to optimally pack DNA-protein binding sites into dense nucleotide sequences, solving an NP-hard problem using integer linear programming.

1 citation

bacteria (other)DNA methylation

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