Author

Susan K. Hannes

Brigham and Women's HospitalORCID 0000-0003-4437-8083Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

Deepak A. RaoiD· 2 shared Joerg ErmanniD· 2 shared Michael B. BrenneriD· 2 shared Nikola C. TeslovichiD· 2 shared Soumya RaychaudhuriiD· 2 shared Anna Helena JonssoniD· 1 shared Chamith Y. FonsekaiD· 1 shared Cristina NavarreteiD· 1 shared

Activity by Year

2018-2020 · peak 1/yr

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10 top collaborators · 39 mutual co-author links

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2 shared papersGenomics

Deepak A. RaoORCID

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2 papers

Recent·Most cited

GenomicsNature GeneticsPeer-reviewedFeb 17, 2020

Allele-specific expression changes dynamically during T cell activation in HLA and other autoimmune loci

María Gutiérrez‐Arcelus, Yuriy Baglaenko, Jatin Arora…·Soumya Raychaudhuri

The paper identifies dynamic allele-specific expression changes in T cell activation, particularly in HLA genes, showing regulatory effects linked to autoimmune risk.

124 citationstop 1%

humanbulk RNA-seq

𝕏 PostBluesky

BioinformaticsScience Translational MedicinePeer-reviewedOct 17, 2018

Mixed Effects Association of Single Cells Identifies an Expanded Th1-Skewed Cytotoxic Effector CD4+ T Cell Subset in Rheumatoid Arthritis

Chamith Y. Fonseka, Deepak A. Rao, Nikola C. Teslovich…·Soumya Raychaudhuri

The paper introduces MASC, a method to identify disease-associated cell subsets in single-cell data, and finds an expanded Th1-skewed cytotoxic CD4+ T cell subset in rheumatoid arthritis.

177 citationstop 1%

humanbulk RNA-seq

𝕏 PostBluesky