BioinformaticsbioRxivPreprint
CPLfold: Chimeric and Pseudoknot-capable almost Linear-time RNA Secondary Structure Prediction
Ke Wang, Grzegorz R. Kudla, Shay B. Cohen
CPLfold improves RNA secondary structure prediction by incorporating chimeric evidence and pseudoknots, achieving better accuracy on long sequences and benchmarks.
DOI 10.64898/2026.02.12.704779