Author

Ingo B. Autenrieth

German Center for Infection ResearchORCID 0000-0003-4573-1336Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Assay:metagenomics· 1 Research Focus:trajectory inference· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Jan LieseiD· 2 shared Matthias WillmanniD· 2 shared Silke PeteriD· 2 shared Anna GórskaiD· 1 shared Caspar GroßiD· 1 shared Daniel H. HusoniD· 1 shared Daniela BezdaniD· 1 shared Daniela DörfeliD· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersGenomics

Jan LieseORCID

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2 papers

Recent·Most cited

GenomicsmSpherePeer-reviewedAug 18, 2020

Tracking of antibiotic resistance transfer and rapid plasmid evolution in a hospital setting by Nanopore sequencing

Silke Peter, Mattia Bosio, Caspar Groß…·Stephan Ossowski

The paper uses Nanopore sequencing to track antibiotic resistance plasmid evolution and transfer between bacterial species in a hospital setting, identifying plasmid fusion and gene rearrangements.

102 citationstop 3%

humanwhole-genome sequencing

𝕏 PostBluesky

BioinformaticsbioRxivPreprintOct 8, 2019

Human gut mobileome during antibiotic therapy. A trajectory-based approach to analysis of the metagenomic time-series datasets

Anna Górska, Robert Schlaberg, Matthias Willmann…·Silke Peter

The paper analyzes metagenomic time-series data to track the spread of antibiotic resistance genes through bacterial chromosomes, plasmids, and phages during antibiotic therapy.

DOI 10.1101/793737

humanmetagenomics

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