Silke Peter

The paper uses Nanopore sequencing to track antibiotic resistance plasmid evolution and transfer between bacterial species in a hospital setting, identifying plasmid fusion and gene rearrangements.

The paper analyzes metagenomic time-series data to track the spread of antibiotic resistance genes through bacterial chromosomes, plasmids, and phages during antibiotic therapy.

The paper identifies novel pathogen-derived biomarkers associated with mortality in Pseudomonas aeruginosa bloodstream infections using a multi-omics approach.