Author

Yu Zhu

Boston CollegeORCID 0009-0000-3617-0261Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Yu Zhu1 paper · Walter and Eliza Hall Institute of Medical Research;

Biology Disciplines

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Bioinformatics· 1 Ecology· 1

Signature Assays, Organisms & Methods

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Research Focus:batch correction / integration· 1 Approach:contrastive learning· 1 Research Focus:deconvolution· 1 Research Focus:dimensionality reduction· 1 Assay:imaging· 1 Approach:statistical model· 1 Approach:variational autoencoder· 1

Frequent Co-Authors

Aidas AglinskasiD· 1 shared Babak MomeniiD· 1 shared Stefano AnzellottiiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

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3 top collaborators · 1 mutual co-author link

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1 shared paperBioinformatics

Aidas AglinskasORCID

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2 papers

Recent·Most cited

BioinformaticsNature MethodsPeer-reviewedNov 28, 2025

DeepCor: Denoising fMRI Data with Contrastive Autoencoders

Yu Zhu, Aidas Aglinskas, Stefano Anzellotti

DeepCor improves fMRI denoising by using contrastive autoencoders, outperforming CompCor on simulated data and enhancing connectivity differences in real datasets.

2 citations

imagingcontrastive learning

𝕏 PostBluesky

EcologyPLoS Computational BiologyPeer-reviewedJun 12, 2024

Revisiting the invasion paradox: resistance-richness relationship is driven by augmentation and displacement trends

Yu Zhu, Babak Momeni

The paper uses mathematical simulations to show colonization resistance does not have a monotonic relationship with species richness, but instead depends on augmentation and displacement trends.

4 citations

statistical model

𝕏 PostBluesky