Author

Ningyuan You

Sir Run Run Shaw HospitalORCID 0009-0000-3630-1604Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Approach:machine learning (classical)· 1 Approach:statistical model· 1

Frequent Co-Authors

Chang LiuiD· 1 shared Gang CheniD· 1 shared Hai Bo LiniD· 1 shared Ning SheniD· 1 shared Sai WuiD· 1 shared

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2025-2025 · peak 1/yr

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5 top collaborators · 10 mutual co-author links

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1 shared paperGenomics

Chang LiuORCID

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1 paper

Recent·Most cited

GenomicsNature CommunicationsPeer-reviewedDec 7, 2025

Benchmarking Pre-trained Genomic Language Models for RNA Sequence-Related Predictive Applications

Ningyuan You, Chang Liu, Hai Bo Lin…·Ning Shen

This study benchmarks eight pre-trained genomic language models on RNA sequence prediction tasks, finding that larger models are not always better and that integrating biological information improves performance.

7 citations

bulk RNA-seqstatistical model

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