Author

Kalidou Ba

Institut national de recherche en sciences et technologies du numériqueORCID 0009-0000-3898-5333Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Assay:bulk RNA-seq· 2 Approach:statistical model· 2 Research Focus:deconvolution· 1 Approach:optimal transport· 1

Frequent Co-Authors

Boris P. HejblumiD· 2 shared Rodolphe ThiébautiD· 2 shared Denis M. AgnieliD· 1 shared Xavier HinautiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 5 mutual co-author links

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2 shared papersBioinformatics

Boris P. HejblumORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJun 22, 2026

When Less Is Not More: DICEPro Mitigates the Impact of Incomplete Reference Matrices on Cellular Frequency Deconvolution.

Kalidou Ba, Rodolphe Thiébaut, Xavier Hinaut, Boris P. Hejblum

The paper evaluates deconvolution methods' robustness to incomplete reference matrices and introduces DICEPro to improve performance by adjusting reference signatures.

DOI 10.64898/2026.06.17.732876

bulk RNA-seqstatistical model

𝕏 PostBluesky

BioinformaticsGenome biologyPeer-reviewedOct 30, 2024

Neglecting normalization impact in semi-synthetic RNA-seq data simulation generates artificial false positives

Boris P. Hejblum, Kalidou Ba, Rodolphe Thiébaut, Denis M. Agniel

The paper identifies an issue in RNA-seq data simulation where normalization neglect leads to false positives and provides corrected results showing dearseq's performance.

6 citations

bulk RNA-seqstatistical model

𝕏 PostBluesky