Author

Abu Bakar

Al-Shifa Trust Eye HospitalORCID 0009-0000-4303-7872Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Organism:human· 2 Research Focus:variant calling· 2 Organism:bacteria (other)· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Abdul MananiD· 1 shared Ali Amar· 1 shared Atiq Ahmad· 1 shared Ayman Ali Mohammed AlameeniD· 1 shared Haiba KauliD· 1 shared Hamid MustafaiD· 1 shared Muhammad Asif NaveediD· 1 shared Osheen Sajjad· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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1 shared paperGenomics

Abdul MananORCID

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintAug 11, 2026

Genome-Wide Selection Signatures in Nili-Ravi Buffalo (Bubalus bubalis) Reveal a T-Cell Costimulatory and Cytokine-Signaling Gene Network Distinct from Classical Bovine Tuberculosis Candidate Genes

Atiq Ahmad, Abu Bakar, Sheikh Muhammad Laeeque…·Hamid Mustafa

The paper identifies six novel immune-related genes in Nili-Ravi buffalo with selection signatures distinct from classical bovine tuberculosis candidate genes.

DOI 10.64898/2026.08.10.743898

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJul 23, 2026

GenoSim: A Forward-Time Genotype Simulator for Clinical and Population Genetics with Population Stratification

Abu Bakar, Rutaba Gul, Tayyab Afghani, Saad Serfraz

GenoSim simulates diploid SNP genotypes with population stratification and pedigree constraints, providing outputs compatible with clinical and population genetics formats.

DOI 10.64898/2026.06.20.733503

humanwhole-genome sequencing

𝕏 PostBluesky

GenomicsbioRxivPreprintSep 23, 2025

Identification of Novel Fusion Genes in Pediatric B-ALL patients Using Whole Transcriptome Sequencing

Osheen Sajjad, Ali Amar, Abu Bakar…·Saqib Mahmood

This study identifies 19 high-confidence fusion genes in 12 pediatric B-ALL patients using whole transcriptome sequencing, revealing novel and unreported fusion events.

DOI 10.1101/2025.09.23.677992

humanwhole-genome sequencing

𝕏 PostBluesky