Author

Christiano C. Simoes

Boyce Thompson InstituteORCID 0009-0000-9072-734XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:plant (other)· 2 Research Focus:software / tool· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Assay:imaging· 1 Approach:statistical model· 1

Frequent Co-Authors

Lukas A. MuelleriD· 2 shared Adrian F. PowelliD· 1 shared Allison Krill-Brown· 1 shared Bryan J. EllerbrockiD· 1 shared Christian E. LammiD· 1 shared Clayton L. BirkettiD· 1 shared David J. WaringiD· 1 shared Guillaume Jean BauchetiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersBioinformatics

Lukas A. MuellerORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 3, 2026

Breedbase 2.0 - expanding the functionality for traditional breeding and transgenics

Srikanth Kumar Karaikal, Ryan S Preble, David J. Waring…·Lukas A. Mueller

Breedbase 2.0 introduces new features for managing plant breeding data, including improved data handling, user permissions, trial quality control, and tools for transgenics and field layout.

DOI 10.64898/2026.09.28.755108

plant (other)software / tool

𝕏 PostBluesky

BioinformaticsThe Plant Phenome JournalPeer-reviewedJan 1, 2021

Making WAVES in Breedbase: An Integrated Spectral Data Storage and Analysis Pipeline for Plant Breeding Programs

Jenna L. Hershberger, Nicolás Morales, Christiano C. Simoes…·Michael A. Gore

The paper develops an open-source R package, waves, for spectral data analysis in plant breeding and integrates it into the Breedbase database to enhance spectral data handling and analysis.

25 citations

plant (other)imaging

𝕏 PostBluesky