Author

Grace Nye

SLAC National Accelerator LaboratoryORCID 0009-0001-6698-9988Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biophysics· 2

Signature Assays, Organisms & Methods

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Research Focus:protein structure prediction· 2 Organism:bacteria (other)· 1 Assay:cryo-EM· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Assay:imaging· 1 Assay:long-read sequencing· 1 Research Focus:phylogenetics / evolution· 1

Frequent Co-Authors

Rachael C. KretschiD· 2 shared Rhiju DasiD· 2 shared Yuan WuiD· 2 shared Arsenii O. ZinkevichiD· 1 shared Artemy BakuliniD· 1 shared Christian A. ChoeiD· 1 shared Christof HenkeliD· 1 shared Daniel KrstevskiiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBiophysics

Rachael C. KretschORCID

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2 papers

Recent·Most cited

BiophysicsNaturePeer-reviewedMay 6, 2025

✦ In-depth digest

Naturally ornate RNA-only complexes revealed by cryo-EM

Rachael C. Kretsch, Yuan Wu, Svetlana A. Shabalina…·Rhiju Das

Cryo-EM at 2.9-3.1 Å shows bacterial OLE, ROOL and GOLLD RNAs self-assemble without protein into a dimer, an 8-chain nanocage and a 14-chain nanocage.

30 citationstop 1%

bacteria (other)virus

𝕏 PostBluesky

BiophysicsbioRxivPreprintFeb 24, 2024

Ribonanza: deep learning of RNA structure through dual crowdsourcing

Shujun He, Rui Huang, Jill Townley…·Rhiju Das

The paper introduces RibonanzaNet, a deep learning model trained on crowdsourced RNA chemical mapping data to predict RNA structure and related properties.

39 citations

long-read sequencingdeep learning

𝕏 PostBluesky