Author

Zeinab Sheikhitarghi

ORCID 0009-0001-7537-984XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Organism:Arabidopsis· 1 Assay:ATAC-seq· 1 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Approach:large language model· 1

Frequent Co-Authors

Alexey RukhovichiD· 1 shared Amélie BarozetiD· 1 shared Cyril Véran· 1 shared Gary KlajeriD· 1 shared Gregory AndrewsiD· 1 shared Jean Ogier du TerrailiD· 1 shared Léonard Strouk· 1 shared Thomas JanssooneiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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9 top collaborators · 36 mutual co-author links

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1 shared paperPlant Biology

Alexey RukhovichORCID

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1 paper

Recent·Most cited

Plant BiologybioRxivPreprintSep 23, 2026

✦ In-depth digest

BOTANIC-1: a series of long-context plant genomic foundation models in the agentic era

Amélie Barozet, Vincent Cabeli, Jean Ogier du Terrail…·Léonard Strouk

Bidirectional Mamba2 plant genomic language models (318M to 3.2B parameters) trained on 320 land-plant genomes top a 22-task frozen-model aggregate; a small variant reaches 131,072 bp context.

DOI 10.64898/2026.09.04.749355

plant (other)Arabidopsis

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