GenomicsNature GeneticsPeer-reviewed
Transcriptome-wide characterization of genetic perturbations
Ajay Nadig, Joseph M. Replogle, Angela N. Pogson…·Luke Jen O’Connor
The paper introduces TRADE, a statistical framework to detect transcriptome-wide differential expression effects from noisy Perturb-seq data, showing that many true effects are not statistically significant but detectable in aggregate.
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