Author

Maya Caskey

California Institute of TechnologyORCID 0009-0001-7629-0812Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:batch correction / integration· 1 Research Focus:benchmarking· 1 Organism:human· 1 Organism:mouse· 1 Organism:rat· 1

Frequent Co-Authors

Ingileif B. HallgrímsdóttiriD· 2 shared Ali MortazaviiD· 1 shared Joseph Matthew RichiD· 1 shared Lior S. PachteriD· 1 shared Ryan Weber· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

5 top collaborators · 10 mutual co-author links

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2 shared papersGenomics

Ingileif B. HallgrímsdóttirORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintOct 11, 2026

A Unified Comparison of 10X Genomics and Parse Biosciences scRNA-seq Technologies

Maya Caskey, Ingileif B. Hallgrímsdóttir

This study compares 10X Genomics and Parse Biosciences scRNA-seq technologies, finding platform-specific biases in gene counts and composition, with Parse showing GC-content bias and potential nuclear RNA enrichment.

DOI 10.64898/2026.10.09.758116

humanmouse

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BioinformaticsbioRxivPreprintMar 6, 2026

Single-Cell Genomics Decontamination with CellSweep

Maya Caskey, Joseph Matthew Rich, Ryan Weber…·Ingileif B. Hallgrímsdóttir

CellSweep removes technical contamination from single-cell genomics data, improving accuracy in downstream analysis.

3 citations

scRNA-seqstatistical model

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