Author

Ibrahim H. Topkaya

SUNY Upstate Medical UniversityORCID 0009-0001-8728-7168Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Immunology· 2

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Organism:mouse· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Mobin A KarimiiD· 2 shared Ali Mobeen· 1 shared Hui XiongiD· 1 shared Li CheniD· 1 shared Liye SuoiD· 1 shared MD Saddam Hossain· 1 shared Rosanne TrevailiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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2 shared papersImmunology

Mobin A KarimiORCID

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2 papers

Recent·Most cited

ImmunologybioRxivPreprintOct 8, 2026

ITK deficiency protects against autoimmune pulmonary hemorrhage by promoting Amphiregulin producing regulatory T cells

MD Saddam Hossain, Ali Mobeen, Ibrahim H. Topkaya…·Mobin A Karimi

This study identifies ITK deficiency as protective against autoimmune pulmonary hemorrhage by enhancing regulatory T cells that produce amphiregulin, promoting tissue repair.

DOI 10.64898/2026.05.01.722312

mousestatistical model

𝕏 PostBluesky

ImmunologybioRxivPreprintSep 4, 2026

Differentiation-coupled intron retention reveals a candidate NKG2D-TR-like isoform at the murine Klrk1 locus

Ibrahim H. Topkaya, Mobin A Karimi

The paper identifies a murine Klrk1 isoform, Klrk1-203, that may function as a differentiation-associated regulator of NKG2D, similar to the human NKG2D-TR isoform.

DOI 10.64898/2026.08.21.746301

mousebulk RNA-seq

𝕏 PostBluesky