Author

Vikram Ramavarapu

University of Illinois Urbana-ChampaignORCID 0009-0001-8875-7213Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Organism:human· 1 Approach:statistical model· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Abigail BunkumiD· 1 shared Ariana HuebneriD· 1 shared Mohammed El-KebiriD· 1 shared Mrinmoy Saha RodduriD· 1 shared Nicholas McGranahaniD· 1 shared Roman MineyeviD· 1 shared Simone ZaccariaiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperCancer Biology

Abigail BunkumORCID

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1 paper

Recent·Most cited

Cancer BiologyLecture notes in computer sciencePeer-reviewedJan 1, 2025

Characterizing the Solution Space of Migration Histories of Metastatic Cancers with MACH2

Mrinmoy Saha Roddur, Vikram Ramavarapu, Abigail Bunkum…·Mohammed El-Kebir

The paper introduces MACH2, a method to systematically enumerate all plausible migration histories of metastatic cancers, outperforming existing methods and detecting extensive uncertainty in real cancer data.

1 citationtop 4%

humanbulk RNA-seq