Author

Alice Barnett

Wellcome Sanger InstituteORCID 0009-0001-9544-459XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:eQTL / molecular QTL mapping· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

A. Tsingene· 2 shared Andrew J. KnightsiD· 2 shared Carl A. AndersoniD· 2 shared Céline Gomez· 2 shared Daniel J. GaffneyiD· 2 shared Lorena Boquete VilarinoiD· 2 shared Maria ImaziD· 2 shared Natsuhiko KumasakaiD· 2 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

A. Tsingene

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2 papers

Recent·Most cited

GenomicsNature CommunicationsPeer-reviewedAug 27, 2025

Gene expression QTL mapping in stimulated iPSC-derived macrophages provides insights into common complex diseases.

Nikolaos I. Panousis, Omar El Garwany, Andrew J. Knights…·Daniel J. Gaffney

The paper maps eQTLs in stimulated iPSC-derived macrophages and identifies condition-specific reQTLs that colocalize with disease-associated variants.

15 citationstop 2%

humanbulk RNA-seq

𝕏 PostBluesky

GenomicsbioRxivPreprintMay 29, 2023

Low-usage splice junctions underpin immune-mediated disease risk

Omar El Garwany, Nikolaos I. Panousis, Andrew J. Knights…·Carl A. Anderson

The paper identifies low-usage splice junctions as contributors to immune-mediated disease risk by linking sQTLs to disease loci and showing their impact on gene expression in inflammation.

3 citations

humanwhole-genome sequencing

𝕏 PostBluesky