Author

Jeffrey Shi

Pennsylvania State UniversityORCID 0009-0002-0796-4489Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:ChIP-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Organism:human· 1

Frequent Co-Authors

Alexis MorrisseyiD· 1 shared Daniela Q. JamesiD· 1 shared Shaun MahonyiD· 1 shared

Activity by Year

2024-2024 · peak 1/yr

Co-Author Collaboration Network

3 top collaborators · 3 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Alexis MorrisseyORCID

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

Allo: Accurate allocation of multi-mapped reads enables regulatory element analysis at repeats

Alexis Morrissey, Jeffrey Shi, Daniela Q. James, Shaun Mahony

Allo improves regulatory element analysis in repetitive regions by accurately allocating multi-mapped reads, leading to the discovery of new peaks and interactions in ChIP-seq data.

Genome Research · Jun 1, 2024Peer-reviewedBioinformatics