Author

Kailey Hua

Carnegie Mellon UniversityORCID 0009-0003-3508-833XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Assay:metagenomics· 1 Approach:statistical model· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Ellie Haber· 1 shared Jian MaiD· 1 shared McKenna Loop YaoiD· 1 shared Peijun Lin· 1 shared Wenjun ZhangiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

5 top collaborators · 4 mutual co-author links

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1 shared paperBioinformatics

Ellie Haber

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintFeb 27, 2026

Uncertainty-aware synthetic lethality prediction with pretrained foundation models

Kailey Hua, Ellie Haber, Jian Ma

This paper predicts synthetic lethal gene pairs using a foundation model-based framework with uncertainty calibration, improving performance without relying on PPI or GO data.

DOI 10.64898/2026.02.25.708096

humanbulk RNA-seq

𝕏 PostBluesky

BioinformaticsJournal of Industrial Microbiology & BiotechnologyPeer-reviewedJan 1, 2026

The biosynthetic gene cluster landscape of the oral microbiome across health and dental caries

McKenna Loop Yao, Peijun Lin, Kailey Hua, Wenjun Zhang

The paper analyzes BGCs in oral microbiome metagenomic and metatranscriptomic data to identify their abundance and association with health and dental caries.

2 citationstop 4%

humanmetagenomics

𝕏 PostBluesky