Author

Haenara Shin

ORCID 0009-0004-6158-1053Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:benchmarking· 2 Assay:scRNA-seq· 2 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:dimensionality reduction· 1 Research Focus:gene regulatory network inference· 1 Approach:large language model· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Daeseung LeeiD· 2 shared Dongjoo LeeiD· 2 shared Hongyoon ChoiiD· 2 shared Jeongbin ParkiD· 1 shared Jiwon KimiD· 1 shared Sumin KimiD· 1 shared Sungwoo BaeiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Daeseung LeeORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJan 13, 2026

Generative single-cell transcriptomics via large language models

Hongyoon Choi, Haenara Shin, Dongjoo Lee, Daeseung Lee

This paper introduces PGL, a large language model that generates synthetic single-cell RNA-seq data from metadata, enabling virtual cohort construction and reference-on-demand analysis.

1 citation

scRNA-seqlarge language model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintMay 8, 2024

CELLama: Foundation Model for Single Cell and Spatial Transcriptomics by Cell Embedding Leveraging Language Model Abilities

Hongyoon Choi, Jeongbin Park, Sumin Kim…·Daeseung Lee

CELLama transforms single-cell and spatial transcriptomics data into embeddings using language model abilities, enabling flexible analysis without manual reference data.

13 citations

scRNA-seqspatial transcriptomics

𝕏 PostBluesky