Author

Anna Jiang

City University of Hong KongORCID 0009-0004-8252-2415Unclaimed ORCID profile · follow to get notified of new preprints

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Anna Jiang1 paper · Howard Hughes Medical Institute

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Research Focus:differential expression· 3 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:gene regulatory network inference· 1 Approach:graph neural network· 1 Organism:human· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Chengshang LyuiD· 3 shared Lingxi CheniD· 3 shared Karaseva Ng· 2 shared Xiaoyu LiuiD· 2 shared Yinhu LiiD· 1 shared

Activity by Year

2025-2025 · peak 3/yr

Co-Author Collaboration Network

5 top collaborators · 9 mutual co-author links

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3 shared papersBioinformatics

Chengshang LyuORCID

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3 papers

Recent·Most cited

Learning Invariant Graph Representations for Cox Survival Modeling under Distribution Shifts

Karaseva Ng, Chengshang Lyu, Anna Jiang, Yinhu Li, Lingxi Chen

This paper introduces InvGraphCox, a framework that improves survival prediction by learning invariant graph representations under distribution shifts, outperforming baselines in discrimination and risk stratification.

bioRxiv · Dec 12, 2025 · PreprintBioinformatics

Predicting Early Transitions in Respiratory Virus Infections via Critical Transient Gene Interactions

Chengshang Lyu, Anna Jiang, Karaseva Ng, Xiaoyu Liu, Lingxi Chen

CRISGI identifies critical transient gene interactions from bulk RNA-seq data to predict early respiratory virus infections and their onset timing across multiple viruses.

bioRxiv · Apr 18, 2025 · PreprintBioinformatics

Gene interaction enrichment analysis for transcriptomic data with GREA

Xiaoyu Liu, Anna Jiang, Chengshang Lyu, Lingxi Chen

GREA improves gene set enrichment analysis by incorporating gene interactions, outperforming existing tools in detecting pathways related to respiratory viral infections.

bioRxiv · Apr 15, 2025 · PreprintBioinformatics