Author

Craig J. Benham

University of California, DavisORCID 0009-0005-4610-2402Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biophysics· 1

Signature Assays, Organisms & Methods

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Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Aalap MogreiD· 1 shared Carsten KrögeriD· 1 shared Charles J. DormaniD· 1 shared Penn Faulkner RainfordiD· 1 shared Sarah Anne HarrisiD· 1 shared Susan StepneyiD· 1 shared Victor Velasco-BerrellezaiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperBiophysics

Aalap MogreORCID

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1 paper

Recent·Most cited

BiophysicsNucleic Acids ResearchPeer-reviewedFeb 4, 2026

TORCphysics: A physical model of DNA-topology-controlled gene expression

Victor Velasco-Berrelleza, Penn Faulkner Rainford, Aalap Mogre…·Sarah Anne Harris

This paper introduces a physical model called TORCphysics that simulates DNA supercoiling-mediated gene expression regulation using genome architecture inputs.

1 citation

DNA methylationwhole-genome sequencing

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