BioinformaticsJournal of Computational BiologyPeer-reviewed
Pareto optimization of masked superstrings improves compression of pan-genome k-mer sets
Ján Plachý, Ondřej Sladký, Karel Břinda, Pavel Veselý
This paper introduces a Pareto optimization method for masked superstrings to improve the compression of pan-genome k-mer sets, achieving 12-19% better compressibility.
DOI 10.1177/15578666261491601