Author

Matthew Runyan

Northeastern UniversityORCID 0009-0006-1236-5201Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Organism:human· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Aabida SaferaliiD· 1 shared Ayan PauliD· 1 shared Congjian Liu· 1 shared David Geller-McGrath· 1 shared Jennifer DyiD· 1 shared P J Castaldi· 1 shared Predrag Radivojac AiD· 1 shared Saumya Gupta· 1 shared

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2026-2026 · peak 1/yr

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1 shared paperGenomics

Aabida SaferaliORCID

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1 paper

Recent·Most cited

GenomicsbioRxivPreprintJun 11, 2026

Improving splice site usage prediction with SPLAIRE

Matthew Runyan, Saumya Gupta, Yul Leshaem…·Ayan Paul

The paper evaluates splicing models, identifies performance gaps, and introduces a cell-type-specific model for improved splice site prediction in human airway epithelial cells.

DOI 10.64898/2026.06.08.731019

humanDNA methylation

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