Author

Ayush Gupta

University of HoustonORCID 0009-0006-1702-6946Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:cryo-EM· 1 Approach:deep learning· 1 Approach:statistical model· 1

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Ambuj SrivastavaiD· 1 shared Anika JainiD· 1 shared Anouka Saha· 1 shared Arne ElofssoniD· 1 shared Chandran NithiniD· 1 shared Daisuke KiharaiD· 1 shared David Andrew CaseiD· 1 shared David Y. C. HuangiD· 1 shared

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2025-2025 · peak 1/yr

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1 shared paperBiophysics

Ambuj SrivastavaORCID

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1 paper

Recent·Most cited

BiophysicsProteins Structure Function and BioinformaticsPeer-reviewedNov 8, 2025

Blind Prediction of Complex Water and Ion Ensembles Around RNA in CASP16

Rachael C. Kretsch, Elisa Posani, Eugene F. Baulin…·Rhiju Das

This paper evaluates blind predictions of dynamic water and ion ensembles around RNA using cryo-EM densities from CASP16, finding that molecular dynamics approaches perform best.

5 citations

cryo-EMdeep learning

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