Author

Jiahao He

Jimei UniversityORCID 0009-0006-6263-2144Unclaimed ORCID profile · follow to get notified of new preprints

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Jiahao He1 paper · Xihua University

Biology Disciplines

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Bioinformatics· 1 Biophysics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Assay:protein structure· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Organism:E. coli· 1 Approach:machine learning (classical)· 1 Research Focus:protein folding & dynamics· 1

Frequent Co-Authors

Yandong HuangiD· 3 shared Jing HuangiD· 1 shared Keying WangiD· 1 shared Minying LowiD· 1 shared Qiuchen Yue· 1 shared Shuo Sun· 1 shared Tengyu XieiD· 1 shared Tiefeng SongiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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3 shared papersBioinformatics

Yandong HuangORCID

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJul 23, 2026

pHaseMD4AI: Phase-Space Dynamics Dataset with Chemical and pH Perturbations for Physically and Kinetically Consistent Biomolecular AI

Tiefeng Song, Yixin Guo, Jiahao He…·Yong Wang

The paper introduces pHaseMD4AI, a molecular dynamics dataset with chemical and pH perturbations, to support biomolecular AI research and benchmarking.

DOI 10.64898/2026.07.20.739474

protein structureprotein sequence

𝕏 PostBluesky

Molecular BiologybioRxivPreprintNov 14, 2025

MPKaDB: A pKa Database for Exploring pH Dependence in Membrane Proteins

Jiahao He, Yansheng Chen, WU Jinxi…·Yandong Huang

MPKaDB provides a database of pKa values for membrane proteins to explore pH-dependent protonation states and their functional implications.

DOI 10.1101/2025.11.14.688495

protein structurestatistical model

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BiophysicsJournal of Chemical Theory and ComputationPeer-reviewedSep 2, 2025

Molecular mechanism of Na+/H+ antiporting in NhaA

Tengyu Xie, Jiahao He, Shuo Sun…·Yandong Huang

This study uses molecular dynamics simulations to explore the Na+/H+ antiport mechanism of NhaA, revealing conformational transitions and the role of Lys300 in transport.

7 citations

E. colistructural biology

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