Author

Ami Fofana

The Ohio State UniversityORCID 0009-0007-3976-527XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Organism:bacteria (other)· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Matthew B. SullivaniD· 2 shared Aghiad DabouliD· 1 shared Alessandra Gonçalves de MeloiD· 1 shared Bridget B. McGiverniD· 1 shared Cara M. NoeliD· 1 shared Collis BouslimaniD· 1 shared Courtney M. SandersoniD· 1 shared Erica BabusciiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersMicrobiology

Matthew B. SullivanORCID

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2 papers

Recent·Most cited

MicrobiologyPLoS BiologyPeer-reviewedJul 30, 2026

Viruses help rewire carbon metabolism in a methane-suppressed peat microcosm

James A. Riddell, Rokaiya Nurani Shatadru, Garrett J. Smith…·Matthew B. Sullivan

The paper investigates how viral dynamics influence carbon metabolism in peat microcosms amended with catechin, showing that viral lysis redistributes intermediates to sustain methane suppression.

DOI 10.1371/journal.pbio.3003925

metagenomicsdeep learning

𝕏 PostBluesky

MicrobiologyPLoS GeneticsPeer-reviewedJul 20, 2026

Cross-family and phage-specific gene requirements for Klebsiella infection revealed by scalable RB-TnSeq genetic screens

Marissa R. Gittrich, Courtney M. Sanderson, Cara M. Noel…·Matthew B. Sullivan

This study identifies 42 bacterial genes involved in Klebsiella phage infection using RB-TnSeq, revealing cross-family resistance and genus-specific gene dependencies.

1 citation

bacteria (other)whole-genome sequencing

𝕏 PostBluesky