Author

Marie Leleu

Centre National de la Recherche ScientifiqueORCID 0009-0008-1446-665XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Evolutionary Biology· 3 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Research Focus:deconvolution· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Laura A. KatziD· 2 shared Auden Cote‐L’HeureuxiD· 1 shared Catherine TirtiauxiD· 1 shared Christophe ColleoniiD· 1 shared Denis BaurainiD· 1 shared Elinor G. SterneriD· 1 shared Frédéric KerffiD· 1 shared Giulia M. RibeiroiD· 1 shared

Activity by Year

2021-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 10 mutual co-author links

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2 shared papersEvolutionary Biology

Laura A. KatzORCID

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4 papers

Recent·Most cited

Evolutionary BiologybioRxivPreprintOct 23, 2026

Elucidating changes in gene expression driving nuclear dynamics across a foraminiferal life cycle with Pheno2Seq

Elinor G. Sterner, Giulia M. Ribeiro, Marie Leleu, Laura A. Katz

The paper develops Pheno2Seq to study gene expression changes in foraminifera life cycle transitions, identifying genes involved in nuclear dynamics and genome stability.

DOI 10.64898/2026.10.21.760831

scRNA-seqexperimental assay

𝕏 PostBluesky

Evolutionary BiologybioRxivPreprintOct 2, 2026

Characterization of starch metabolism pathways in dinoflagellates, chromerids and apicomplexans highlights the presence of a starch accumulating symbiont in their common ancestor

Ugo Cenci, Malika Chabi, Léa Fermont…·Steven G. Ball

The paper characterizes starch metabolism pathways in dinoflagellates, chromerids, and apicomplexans, revealing evolutionary adaptations linked to plastid endosymbiosis.

DOI 10.64898/2026.09.25.754361

𝕏 PostBluesky

Evolutionary BiologymBioPeer-reviewedAug 27, 2025

Rethinking large scale phylogenomics with EukPhylo v1.0, a flexible toolkit to enable phylogeny-informed data curation and analyses of diverse eukaryotic lineages

Laura A. Katz, Auden Cote‐L’Heureux, Marie Leleu…·Rebecca Gawron

EukPhylo v1.0 improves phylogenomic analysis of eukaryotes by enabling contamination removal, gene family estimation, and transparent, repeatable tree construction.

6 citationstop 5%

multiple specieswhole-genome sequencing

𝕏 PostBluesky

BioinformaticsPeerJPeer-reviewedMay 5, 2021

ToRQuEMaDA: Tool for Retrieving Queried Eubacteria, Metadata and Dereplicating Assemblies

Raphaël R. Léonard, Marie Leleu, Mick Van Vlierberghe…·Denis Baurain

TQMD is a tool for dereplicating prokaryotic genomes using k-mer based methods, optimized for high taxonomic levels and complementary to existing tools.

8 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky