Author

Siyuan Yin

California Institute of TechnologyORCID 0009-0009-4793-1463Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioengineering· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Assay:imaging· 2 Research Focus:cell-cell communication· 1 Organism:chicken / avian· 1 Approach:deep learning· 1 Approach:microscopy & imaging analysis· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Changhuei YangiD· 2 shared Haowen ZhouiD· 2 shared Abdullahi A. Adeboye· 1 shared Anika Arora· 1 shared Carol W. Readhead· 1 shared Cecilia I. Moxley· 1 shared Dianne K. NewmaniD· 1 shared Ellie WangiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersBioengineering

Changhuei YangORCID

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2 papers

Recent·Most cited

BioengineeringbioRxivPreprintApr 17, 2025

Exploring non-invasive sexing of early chick embryos in intact eggs using Laser Speckle Contrast Imaging (LSCI) and Deep Neural Network (DNN)

Simon Mahler, Anika Arora, Carol W. Readhead…·Changhuei Yang

This study uses LSCI and DNN models to attempt early sex identification of chick embryos but finds insufficient accuracy for practical use.

DOI 10.1101/2025.04.17.649355

chicken / avianimaging

𝕏 PostBluesky

MicrobiologyProceedings of the National Academy of SciencesPeer-reviewedAug 6, 2024

Investigating 3D microbial community dynamics in the rhizosphere using complex-field and fluorescence microscopy

Oumeng Zhang, Reinaldo E. Alcalde, Haowen Zhou…·Changhuei Yang

This paper introduces CFAST, a novel imaging technique for 3D microbial community dynamics in the rhizosphere, enabling non-invasive tracking of bacterial behavior and gene expression without genetic labeling.

9 citations

imagingmicroscopy & imaging analysis

𝕏 PostBluesky