Author

Anargyros Skoulakis

Alexander Fleming Biomedical Sciences Research CenterORCID 0009-0009-6257-5284Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Organism:human· 1 Approach:large language model· 1 Assay:proteomics· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Alexandros SimistirasiD· 1 shared Antigone S. DimasiD· 1 shared Christina EmmanouiliD· 1 shared Eleftheria ZegginiiD· 1 shared Georgios A. PavlopoulosiD· 1 shared Hanyu Xiao· 1 shared Ilias Georgakopoulos‐SoaresiD· 1 shared Kimon Antonios Provatas· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Alexandros SimistirasORCID

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintAug 21, 2026

✦ In-depth digest

ResLit: A Large-Scale Automated Literature Mining Database for Antimicrobial Resistance

Anargyros Skoulakis, Hanyu Xiao, Kimon Antonios Provatas…·Ilias Georgakopoulos‐Soares

ResLit couples BioMistral-7B screening with two-pass Qwen3-30B extraction to build an antimicrobial-resistance database of 3,120 genes and 13,593 mutations, evidence-tiered against CARD, ResFinder, and NCBI RGC.

DOI 10.64898/2026.08.14.744991

bacteria (other)large language model

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GenomicsNature CommunicationsPeer-reviewedAug 8, 2026

Diet-responsive proteogenomic effects following short-term restriction of animal products in humans

Alexandros Simistiras, Ozvan Bocher, Christina Emmanouil…·Antigone S. Dimas

The paper identifies diet-responsive cis-pQTLs in humans following short-term animal product restriction, revealing diet-dependent genetic regulation of proteins involved in metabolism and immunity.

1 citation

humanproteomics

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