Biomedical Optics ExpressCancer BiologyPeer-reviewed journal article
Whole-Slide Mapping of Tumor Tissue Fiber Architecture via Computational Scattered Light Imaging
Hamed AbbasiiD, Loes EttemaiD, Rens van ElkiD, Meike EskesiD, Michail DoukasiD, Sjors A. KoppesiD, Stijn KeereweeriD, Miriam MenzeliD
Abstract
Mapping peritumoral collagen fiber directionality in solid tumors may assist in determining cancer progression and support more personalized prognoses. However, existing microscopy techniques are often limited by a restricted field of view, high cost, or incompatibility with paraffin-treated tissues. Computational scattered light imaging (ComSLI) is a cost-effective whole-slide microscopy technique that reveals fiber orientations independent of sample preparation. Using glioma, colorectal, and head and neck cancer samples, we show for the first time that ComSLI maps fiber orientations in paraffin-treated tumor tissues, visualizes tumor growth pathways and desmoplastic reactions, and allows the study of collagen orientations relative to tumor boundaries.
- organism: human
- assay: bulk RNA-seq
- assay: imaging
- research focus: cell type annotation
- research focus: spatial domain detection
- approach: deep learning
- approach: statistical model
- Citations
- 2
- FWCI
- 9.50
- Field percentile
- top 2%
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