Distribution of carbon monoxide-oxidizing microorganisms along a chronosequence on Piton De La Fournaise volcano

Abstract

Volcanic soils provide a unique environment for studying microbial colonization and succession due to their extreme conditions and distinct geochemical profiles. This study focused on carbon monoxide (CO)-oxidizing microbial communities in volcanic soils of varying ages at Piton De La Fournaise (Reunion island). Soil samples from three sites were analyzed to assess microbial community structure using 16S rRNA gene sequencing and metagenomic analysis to identify functional genes involved in CO oxidation. The activity of CO oxidizing microbes in soils was measured. Phylum-level analysis showed increasing Acidobacteriota and Chloroflexota, decreasing Actinomycetota and Bacteroidota, and stable Pseudomonadota, while class-level patterns included rising Alphaproteobacteria and Acidobacteriia, with Ktenobacteria emerging in the oldest soils. CO dehydrogenase-related genes were found in 17 metagenome-assembled genomes across all sites. CO-oxidizing microbes were present across soil ages, with detectable activity in the younger soils and greatest activity in the oldest, suggesting that these microbes actively use CO as an energy source even in soils with primary vegetation, contrary to general understanding. The findings highlight the intricate dynamics of microbial succession in volcanic soils and challenge conventional expectations about community complexity over time. Understanding pioneer communities elucidates soil restoration processes, which will become critical when countering anthropogenic soil degradation.